BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017H08SP1|AL427223
(830 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1521 1598 0.0
>3x_Contig1521
Length = 8057
Score = 1598 bits (804), Expect = 0.0
Identities = 825/831 (99%), Gaps = 3/831 (0%)
Strand = Plus / Minus
Query: 1 gatccttaccattccgattagtgagtgggttccataagctcgttgtgtctgtttctgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5888 gatccttaccattccgattagtgagtgggttccataagctcgttgtgtctgtttctgagt 5829
Query: 61 tattgaacgaagaccatttactgtaaatctttctactatattatatatttttacattaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5828 tattgaacgaagaccatttactgtaaatctttctactatattatatatttttacattaac 5769
Query: 121 tcttttttatataacttgtaaaatggagtaaaaaggaaatttagccgctgatgccttcgc 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5768 tcttttttatataacttgtaaaatggagttaaaaggaaatttagccgctgatgccttcgc 5709
Query: 181 taaaatatttaactgctcaattagccttctcagtatgtagatgtgacagcaagawaaaat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5708 taaaatatttaactgctcaattagccttctcagtatgtagatgtgacagcaagataaaat 5649
Query: 241 actcttttgatacgttgtgactttctaccgttcttcgcaatgcctgcagaagtttaatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5648 actcttttgatacgttgtgactttctaccgttcttcgcaatgcctgcagaagtttaatat 5589
Query: 301 ctctttgccttggtttgttaaggtatgatgaacagacaagtaattttaattttgtcgaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5588 ctctttgccttggtttgttaaggtatgatgaacagacaagtaattttaattttgtcgaaa 5529
Query: 361 agaatgaaaaatataataattttcaaaacacgaacaaaacaagtaatgttggagatttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5528 agaatgaaaaatataataattttcaaaacacgaacaaaacaagtaatgttggagatttcc 5469
Query: 421 cagcgcatcgaatttcccaatagggaaattatcaaagcagcattttcatgccactgaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5468 cagcgcatcgaatttcccaatagggaaattatcaaagcagcattttcatgccactgaatc 5409
Query: 481 gctaatccatctaggtgaatgatttctaacgacagatttaggtaatccactgataaagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5408 gctaatccatctaggtgaatgatttctaacgacagatttaggtaatccactgataaagaa 5349
Query: 541 tgagagtattatattcctttcatttttctttaggaatcacaaagcgactgattattggca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5348 tgagagtattatattcctttcatttttctttaggaatcacaaagcgactgattattggca 5289
Query: 601 accccatatcttttaggcatctccccttcgtgctgatctgtaaattgaaggtttatcaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5288 accccatatcttttaggcatctccccttcgtgctgatctgtaaattgaaggtttatcaac 5229
Query: 661 acctgtgtatatataagarctgagtcggtgcatatttcattcatttcccttgcaatgttg 720
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5228 acctgtgtatatataagaactgagtcggtgcatatttcattcatttcccttgcaatgttg 5169
Query: 721 tagcga--cagttcgttctgaaaatacttgtgtttaataacatcaaacaataattaagat 778
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5168 tagcgaagcag-tcgttctgaaaatacttgtgtttaataacatcaaacaataattaagat 5110
Query: 779 aaagcaataaccaatgagttgttgttcgaaaaaggttgctgacagcggcgc 829
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5109 aaagcaataaccaatgagttgttgttcgaaaaaggttgctgacagcggcgc 5059
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7547
Number of Sequences: 1807
Number of extensions: 7547
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 830
length of database: 10,358,551
effective HSP length: 16
effective length of query: 814
effective length of database: 10,329,639
effective search space: 8408326146
effective search space used: 8408326146
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)